PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_005753
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 283aa    MW: 32511.9 Da    PI: 4.5803
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_005753genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.43.4e-2955113259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YY+C+++ +C++kk+ver+++d ++++itY+++Hnh+
  DCAR_005753  55 SDCWSWRKYGQKPIKGSPYPRGYYKCSTSkSCSAKKQVERCKTDASLLIITYTSTHNHQ 113
                  699***********************9988****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.5E-3046115IPR003657WRKY domain
PROSITE profilePS5081129.56249115IPR003657WRKY domain
SuperFamilySSF1182901.2E-2452115IPR003657WRKY domain
SMARTSM007741.9E-3254114IPR003657WRKY domain
PfamPF031061.8E-2356113IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MKSSDHSRIL STNISKDMSE PEASKKQKIY QKRVVAVKID ENEYDKKQKS EGPPSDCWSW  60
RKYGQKPIKG SPYPRGYYKC STSKSCSAKK QVERCKTDAS LLIITYTSTH NHQSPKEPKE  120
VEDPKQSEDP KEVEDTKQSE DPKHDELKIE NNITEEPKEE DDKVEEAVNV QEGEAVNVQD  180
GVSTENITEF YYCQSPFTSN SDHQDMIATI KYEEERLGSP LTEKLESVVF EEKSEEPLCC  240
PHLMTFSTDE YDFYDELGEL PISSSLTRFM RSNFSEERIL IQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-16551151574WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLK4EN486e-94K4EN48_PANQU; WRKY4
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112812025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.13e-26WRKY DNA-binding protein 69